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COLLABORATION AND LICENSE AGREEMENT

Collaboration Agreement

COLLABORATION AND LICENSE AGREEMENT | Document Parties: SGX PHARMACEUTICALS, INC. | STRUCTURAL GENOMIX, INC. You are currently viewing:
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SGX PHARMACEUTICALS, INC. | STRUCTURAL GENOMIX, INC.

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Title: COLLABORATION AND LICENSE AGREEMENT
Governing Law: Delaware     Date: 9/2/2005

COLLABORATION AND LICENSE AGREEMENT, Parties: sgx pharmaceuticals  inc. , structural genomix  inc.
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                                                                   EXHIBIT 10.17

 

                                           *** TEXT OMITTED AND FILED SEPARATELY

                                    PURSUANT TO A CONFIDENTIAL TREATMENT REQUEST

                                             UNDER 17 C.F.R. SECTION 200.80(b)(4)

                                               AND RULE 406 UNDER THE SECURITIES

                                                         ACT OF 1933, AS AMENDED

 

                        COLLABORATION AND LICENSE AGREEMENT

 

      THIS RESEARCH COLLABORATION AND LICENSE AGREEMENT (the "AGREEMENT") is

made and entered into as of April 14, 2003 (the "EFFECTIVE DATE") by and between

STRUCTURAL GENOMIX, INC. a corporation organized and existing under the laws of

the State of Delaware and having its principal place of business at 10505

Roselle Street, San Diego, CA 92121 ("SGX"), and ELI LILLY AND COMPANY, a

corporation organized and existing under the laws of the State of Indiana and

having its principal place of business at Lilly Corporate Center, Indianapolis,

Indiana 46285 (together with its Affiliates, "LILLY"). SGX and Lilly may be

referred to herein individually as a "Party" and collectively as the "Parties."

 

                                    BACKGROUND

 

      WHEREAS, SGX is in the business of conducting research in the field of

high throughput protein structure determination and structure directed drug

discovery;

 

      WHEREAS, Lilly is in the business of discovering, developing,

manufacturing and commercializing pharmaceuticals;

 

      WHEREAS, SGX and Lilly wish to enter into a collaborative research program

to perform structure determination of Lilly drug targets and compounds provided

by Lilly; and

 

      WHEREAS, Lilly desires to obtain access and licenses to certain

technologies and processes of SGX and SGX is willing to grant such access and

licenses on the terms set forth in this Agreement.

 

      NOW, THEREFORE, in consideration of the foregoing and the covenants and

promises contained in this Agreement, the Parties hereby agree as follows:

 

1.     DEFINITIONS

 

      1.1 "Affiliate" means, with respect to a Party hereto, a corporation,

company or other entity that is owned or controlled by such Party by virtue of

such Party's direct or indirect ownership or control of more than fifty percent

(50%) of the outstanding shares or securities (representing the right to vote

for the election of directors or other managing authority) of such corporation,

company or other entity, but such corporation, company or other entity shall be

deemed to be an Affiliate only so long as such ownership or control exists.

 

      1.2 "Collaboration" means the activities conducted by the Parties in

connection with the Research Plan and the Technology Installation Plan.

 

                                  Page 1 of 68

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      1.3 "Collaboration Target(s)" means the targets identified in the attached

Exhibit A, as may be modified from time to time in accordance with Section

2.6(b).

 

      1.4 "Collaboration Technology" means Patent Rights and Know-How which are

conceived or reduced to practice or otherwise developed by or on behalf of Lilly

or SGX, or jointly by Lilly and SGX during and in the performance of the

Research Collaboration; provided however, Collaboration Technology does not

include SGX Background Technology, SGX Process Technology, SGX Additional

Technology or Lilly Background Technology.

 

      1.5 "Controls" or "Controlled" means possession of the ability to grant

the licenses or sublicenses as provided for herein, without violating the terms

of any agreement or other arrangement with a Third Party.

 

      1.6 "[...***...]" means a [...***...] included in the Research

Collaboration in accordance with Section [...***...] and supplied by Lilly to

SGX (including [...***...]), which is [...***...], and which SGX agrees to use

reasonably diligent efforts to [...***...].

 

      1.7 "Eliminated Target" means a Collaboration Target as further defined in

Section 2.9.

 

      1.8 "FTE" means a full time equivalent person year (consisting of a total

of [...***...] ([...***...]) hours per year) of scientific or technical work

carried out by a qualified SGX Employee on or directly related to, the Research

Plan or the Technology Installation Plan.

 

       1.9 "IT Infrastructure" means the hardware and software listed in Part 2

of the attached Exhibit D.

 

      1.10 "JSC" has the meaning ascribed such term in Section 2.7.

 

      1.11 "Know-How" means all ideas, inventions, instructions, designs,

processes, formulas, software, materials, methods, processes, techniques, and

data and all intellectual property rights therein.

 

      1.12 "Licensed Technology" means (i) SGX Process Technology; and (ii) SGX

Improvements, Other Inventions, and SGX Research Stage Technology which Lilly

elects to have installed at a Lilly Facility pursuant to Section 3.6(a).

 

      1.13 "Lilly Background Technology" means Patent Rights and Know-How which

are: (a) owned or Controlled by Lilly on the Effective Date or during the Term

of the Research Collaboration; (b) developed by Lilly (i) outside of the

Research Collaboration or (ii) within the Research Collaboration but are of

general application (for example, have application to other proteins in addition

to the Collaboration Targets); and (c) necessary for the conduct of the Research

Collaboration. Lilly Background Technology includes Lilly Compounds.

 

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      1.14 "Lilly Compound" means a [...***...] that is provided by Lilly to

SGX. Lilly Compound does not include Reference Compounds.

 

      1.15 "Lilly Facility" means the Lilly San Diego Facility or the Lilly

Indianapolis Facility.

 

      1.16 "Lilly Improvements" means Patent Rights and Know How owned or

Controlled by Lilly covering improvements, enhancements or modifications to SGX

Process Technology created by or on behalf of Lilly using SGX Process

Technology, during the Technology Awareness Period, that Lilly has installed at

and are in productive use by the protein crystallography group at Lilly using

the SGX Process Technology and are necessary or useful for the operation of the

SGX Process Technology.

 

      1.17 "Lilly Materials" means the [...***...] embodying Collaboration

Targets, Lilly Compounds, Lilly Reference Compounds and any [...***...] used to

express Collaboration Targets, in each case, which are owned or Controlled by

Lilly.

 

      1.18 "Lilly New Developments" means Patent Rights and Know-How owned or

Controlled by Lilly, covering methods, systems, programs, technology and

software created by or on behalf of Lilly during the Technology Awareness

Period, that are of application in the field of [...***...], that Lilly has

installed at and are in productive use by the [...***...] group at Lilly, but

that are not Lilly Improvements.

 

      1.19 "Lilly San Diego Facility" means either (i) the facility known as

10575 Roselle Street, San Diego, CA 92121 or (ii) the approximately 7,000 sq ft

of available space in SGX's premises at 10581 Roselle Street, San Diego, CA

92121, as mutually agreed by the Parties as soon as practicable following the

Effective Date.

 

      1.20 "Lilly Indianapolis Facility" has the meaning ascribed to such term

in Section 3.2(b).

 

      1.21 "Other Invention" means an invention made by a Party or jointly by

the Parties in the course of executing the Technology Installation Plan.

 

      1.22 "Operating Team" has the meaning ascribed to such term in Section 2.8

 

      1.23 "Patent Rights" means patent applications filed in any country

worldwide, including provisionals, utilities, continuations (in whole or in

part), divisionals, reissues, reexaminations and foreign counterparts thereof,

any patents issued on such applications and any extensions of term,

registrations or confirmations of such patents.

 

      1.24 "Phase IA Acceptance Criteria" means the criteria described in Part 1

of the attached Exhibit G.

 

      1.25 "Phase IB Acceptance Criteria" means the Phase IB(i) and Phase IB(ii)

criteria described in Part 2 of the attached Exhibit G.

 

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      1.26 "Phase II Acceptance Criteria" means the criteria described in Part 3

of the attached Exhibit G.

 

      1.27 "Platform" means the hardware, IT Infrastructure, Third Party

Technology and operating system configuration specified in Exhibit D that is

required for Lilly to have installed at the Lilly Facilities in order to operate

the SGX Process Technology.

 

      1.28 "Platform Changes" has the meaning ascribed such term in Section 3.8.

 

      1.29 "Reference Compound" means for each Collaboration Target, any

compound which is publicly known to be an inhibitor or other modulator of such

Collaboration Target and which is approved by the JSC for inclusion in the

Research Collaboration.

 

      1.30 "Research Collaboration" means the program of research conducted by

the Parties under the Research Plan.

 

      1.31 "Research Plan" means the plan of research attached as Exhibit B to

this Agreement, as may be amended from time to time by the JSC in accordance

with Section 2.7.

 

      1.32 "SGX Background Technology" means all Patent Rights and Know-How

which are: (a) owned or Controlled by SGX on the Effective Date or during the

Term of the Research Collaboration; (b) developed by SGX (i) outside of the

Research Collaboration or (ii) within the Research Collaboration but are of

general application (for example, have application to other proteins in addition

to the Collaboration Targets); and (c) necessary for the conduct of the Research

Collaboration.

 

      1.33 "SGX Bioinformatics Technology" means integrated software tools in

source code form and all documentation reasonably necessary for the use thereof,

(i) within SGX Process Technology which are identified in the attached Exhibit F

and (ii) within SGX Improvements, which are revisions to (i) above (including

for example, error corrections, modifications, improvements and enhancements)

made by SGX during the Technology Awareness Period that SGX has installed and

are in productive use by the relevant research group at SGX using SGX Process

Technology and are necessary or useful for the operation of the SGX Process

Technology, and associated software documentation in hard copy and/or electronic

format, in each case which are owned or Controlled by SGX, and all Patent Rights

and copyrights covering such software tools and documentation.

 

      1.34 "SGX Employee" means an employee or other individual engaged by SGX

who has a duty to assign inventions made by such person, to SGX.

 

      1.35 "SGX Improvements" means Patent Rights and Know How owned or

Controlled by SGX, covering improvements, enhancements or modifications to the

SGX Process Technology created by or on behalf of SGX using SGX Process

Technology, during the Technology Awareness Period, that SGX has installed at

and are in productive use by the research group at SGX using the SGX Process

Technology and are necessary

 

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or useful for the operation of the SGX Process Technology. SGX Improvements does

not include SGX Research Stage Technology.

 

      1.36 "SGX Materials" means (1) the [...***...] materials embodying any

Target Structure; and (2) any [...***...] used to express a Target Structure; in

each case which are owned or Controlled by SGX and are developed in the course

of the Research Collaboration.

 

      1.37 "SGX New Developments" means Patent Rights and Know-How owned or

Controlled by SGX, covering methods, systems, programs, technology and software

created by or on behalf of SGX during the Technology Awareness Period that are

of application in the field of high throughput structure determination, but that

are not SGX Improvements.

 

      1.38 "SGX Research Stage Technology" means Patent Rights and Know How

owned or Controlled by SGX, covering improvements, enhancements or modifications

to the SGX Process Technology, created by or on behalf of SGX using SGX Process

Technology during the Technology Awareness Period, that are: (i) in early stages

of development; (ii) not fully supported within SGX; (iii) not fully integrated

into the SGX Process Technology; or (iv) are not ready for supported transfer to

Third Parties, and (x) will be used by the research group at SGX using SGX

Process Technology and (y) are necessary or useful for the operation of the SGX

Process Technology.

 

      1.39 "SGX Process Technology" means Patent Rights and Know How owned or

Controlled by SGX as of the Effective Date, covering methods, systems, programs,

technology and software, listed in Exhibit F, and including all documentation

reasonably necessary for the use thereof. SGX Process Technology does not

include SGX Research Stage Technology, SGX Improvements, SGX New Technology or

Other Inventions.

 

      1.40 "Target Structure" means, on a [...***...] basis, the [...***...] of

a [...***...] determined by SGX in the course of the Research Collaboration,

either in the [...***...] and which has the following characteristics:

[...***...].

 

      1.41 "Technology Awareness Period" means the period commencing on the

Effective Date and terminating at the end of the Term of the Research

Collaboration.

 

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      1.42 "Technology Installation Plan" means the plan agreed by the Parties

in accordance with Section 3.1.

 

      1.43 "Term of the Research Collaboration" means the period commencing on

the Effective Date, and terminating on the second anniversary of the Effective

Date, unless extended by mutual agreement of the Parties in accordance with

Section 2.10.

 

      1.44 "Term of the Technology Collaboration" means the period commencing on

the Effective Date and terminating upon the expiration of SGX's support

obligations under Section 3.4.

 

      1.45 "Third Party or Third Parties" means any entity other than Lilly or

SGX or their respective Affiliates.

 

      1.46 "Third Party Technology" means software and other technology listed

on Exhibit E, licensed to SGX by a Third Party, which Lilly is likely required

to license directly from such Third Party and which is likely required to

operate fully the SGX Process Technology.

 

2.     RESEARCH COLLABORATION.

 

      2.1 Research Collaboration. Subject to the terms and conditions of this

Agreement Lilly and SGX will use commercially reasonable efforts to conduct the

Research Collaboration in accordance with the Research Plan. It is acknowledged

that in furtherance of the Research Collaboration, SGX commenced certain

research activities prior to the Effective Date. SGX will commit a total of at

least [...***...] FTEs to the Research Collaboration during the

period between March 26, 2003 and the [...***...] anniversary of the Effective

Date, with a minimum of [...***...] FTEs being used between March

26, 2003 and the [...***...] anniversary of the Effective Date.

 

      2.2 Provision of Lilly Compounds. During the Term of the Research

Collaboration, Lilly will, at its sole discretion, deliver Lilly Compounds to

SGX (in quantities for each Lilly Compound prescribed in the Research Plan) for

inclusion in the Research Collaboration. SGX will not attempt directly or

indirectly to determine the structure of Lilly Compounds unless agreed by the

JSC. Lilly Compounds will be deemed Confidential Information of Lilly pursuant

to Section 7.1. The Lilly Compounds that will be used in the Research

Collaboration shall be [...***...].

 

      2.3 Provision of Lilly Background Technology. During the term of the

Research Collaboration, Lilly will provide SGX with reasonable quantities of

such Lilly Materials and other Lilly Background Technology as agreed to by Lilly

that are necessary for the conduct of the Research Collaboration by SGX.

 

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      2.4 Provision of SGX Background Technology and Collaboration Technology.

During the Term of the Research Collaboration, SGX will provide Lilly with

reasonable quantities of available SGX Materials and other SGX Background

Technology and Collaboration Technology as agreed by the JSC and to the extent

reasonably necessary for Lilly to exercise its applicable rights under Article

5.

 

      2.5 Records; Reports. At least quarterly during the Term of the Research

Collaboration SGX will have the obligation to prepare and provide to the JSC a

detailed written report summarizing the progress of the work performed by SGX in

the course of the Research Collaboration during the preceding quarter. Promptly

upon completion of the Research Collaboration, SGX shall provide a final written

report summarizing its activities during the Research Collaboration and the

results thereof. In addition, during the Term of the Research Collaboration, SGX

will provide Lilly with quarterly reports of the time expended on the Research

Collaboration, within thirty (30) days after the close of each quarter. Such

report will include the names of SGX Employees working on the Research

Collaboration and the number of hours each such SGX Employee has allocated to

the Research Collaboration. Upon the written request of Lilly and not more than

once in each calendar year, SGX will permit Lilly, at Lilly's expense, to have

access during normal business hours to those records of SGX that may be

necessary to verify the accuracy of the FTE utilization under the Research

Collaboration and the basis for any other payments hereunder.

 

      2.6 Nomination of Collaboration Targets and Crystallizable Protein.

 

            (a) During the Term of the Research Collaboration, Lilly may

nominate to the JSC up to [...***...] ([...***...])[...***...] other than

Collaboration Targets, for which Lilly would like SGX to attempt to [...***...]

under the Research Plan. SGX will have two (2) weeks following receipt of notice

of nominated [...***...] from LillY to reject (by written notice to Lilly) the

inclusion of any such [...***...] in the Research Collaboration if any such

[...***...] is the subject of an existing research program at SGX or if SGX has

existing contractual obligationS to a Third Party with respect to such

[...***...]. Any [...***...] nominated by Lilly and not rejected by SGX in

accordance with this Section 2.6(a) will be deemed a [...***...].

 

            (b) During the Term of the Research Collaboration, subject to

Section 2.9, Lilly may nominate to the JSC additional [...***...] which Lilly

would like included in the Research Collaboration as Collaboration Targets. SGX

will have two (2) weeks following receipt of notice of any such nominated

[...***...] from Lilly to reject (by written notice to Lilly) the inclusion of

any such [...***...] in the Research Collaboration if such protein is the

subject of an existing research program at SGX or if SGX has existing

contractual obligations to a Third Party with respect to such [...***...]. Any

[...***...] nominated by Lilly and not rejected BY SGX in accordance with this

Section 2.6(b) will be deemed a Collaboration Target.

 

            (c) On or before the earlier of commencement of the Phase IA

Acceptance experiments described in Exhibit G or the start of the [...***...]

month following the Effective Date, the JSC will designate [...***...]

of the Collaboration Targets

 

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  included in the Collaboration prior to such date, for inclusion in the Phase

IB(ii) validation experiments described in Exhibit G; [...***...] of which will

be Level 1, [...***...] of which will be Level 2 and [...***...] of which will

be Level 2(+) (as further described in the Research Plan), and such targets in

each Level will be of a similar level of difficulty as those targets in each

such Level in Exhibit A.

 

      2.7 Joint Steering Committee.

 

            (a) Formation. SGX and Lilly will establish a joint steering

committee ("JSC") to oversee the strategic and tactical aspects of the

Collaboration.

 

            (b) Membership. The JSC shall be comprised of three (3)

representatives from Lilly and three (3) representatives from SGX, designated by

the Parties promptly following the Effective Date. Each Party may replace its

JSC representatives at any time, with written notice to the other Party. The JSC

may name additional members to the JSC from time to time so long as each Party

has an equal number of members. In addition, each Party may at its discretion

invite non-voting employees, consultants or scientific advisors to attend

meetings of the JSC.

 

            (c) Decisions. Each Party shall have one vote on the JSC. All

decisions of the JSC shall be made by unanimous vote. Any matter which the JSC

is unable to agree upon shall be submitted to the Chief Executive Officer of SGX

and the Group Vice President, Lilly Research Laboratories of Lilly for

resolution. All decisions that cannot be agreed upon by the SGX CEO and Lilly

Group Vice President shall be made by Lilly reasonably taking into consideration

the position of SGX, excluding decisions under Sections 3.4(b), 3.4(d) and

3.6(c), which will be made by SGX reasonably taking into consideration the

position of Lilly.

 

            (d) Responsibilities. The JSC will review, direct and supervise the

 

performance of the Collaboration. The JSC will be responsible for (i)

determining the research strategy and time lines for the Research Plan and

allocating resources between Collaboration Targets (provided however, that SGX

will have the right to require that at least [...***...] FTEs are allocated to

the Phase IB validation experiments described in Exhibit G) and modifying or

amending the Research Plan as appropriate subject to the final sentence of this

Section 2.7(d); (ii) designating Collaboration Targets as Eliminated Targets in

accordance with Section 2.9; (iii) designating structures of Collaboration

Targets as Target Structures if they meet the criteria in Section 1.40; ; (iv)

determining whether to obtain licenses from Third Parties with respect to

intellectual property that may be necessary for the conduct of the Research

Collaboration; and (v) discussing patent matters relating to Research Plan

activities. Related to the Technology Installation Plan, the JSC will be

responsible for (i) reviewing and approving the Technology Installation Plan in

accordance with Section 3.1 and modifying or amending the Technology

Installation Plan as appropriate subject to the final sentence of this Section

2.7(d); (ii) determining whether any SGX Improvements, Other Inventions or SGX

Research Stage Technology will be included in the Technology Installation Plan

and supported under Section 3.4; (iii) determining which Licensed Technology

will not be supported in accordance with Section 3.4(d); (iv) agreeing on

additional support at the

 

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Lilly Indianapolis Facility in accordance with Section 3.4(b); and (v)

determining which Platform Changes or Lilly Improvements will be supported at

Lilly in accordance with Section 3.4. Any amendments to the Research Plan or the

Technology Installation Plan which materially alter the nature or scope of the

Research Collaboration or Technology Collaboration must be agreed in writing by

the Parties.

 

            (e) Meetings. The JSC shall meet at least quarterly. The Parties

shall mutually agree upon times and places for such meetings (alternating

between San Diego, CA and Indianapolis, IN, or as the JSC may otherwise agree),

to discharge its responsibilities. If mutually agreed by the Parties, such

meeting may be held via videoconference or teleconference. Each Party will be

responsible for paying its own expenses in connection with participating in the

meetings of the JSC. The JSC shall prepare written minutes of each meeting and a

written record of all JSC decisions, whether made at a JSC meeting or otherwise.

 

      2.8 Operating Teams. The JSC may appoint one or more other working teams

("Operating Teams") to perform the day-to-day implementation of the Research

Plan and Technology Installation Plan and such other functions as the JSC may

determine.

 

            (a) Membership. All Operating Teams shall have at least one (1)

representative of each Party. Operating Teams shall have such decision-making

authority as may be delegated to them by the JSC. Each Party may replace its

Operating Team representatives at any time, upon written notice to the other

Party. Operating Team leaders at their discretion can name additional team

members or form sub-teams.

 

            (b) Decisions. Each Party shall have one vote on an Operating Team.

All decisions of the Operating Teams shall be made by unanimous vote. Any matter

that the Operating Team is unable to agree upon shall be submitted to the JSC.

 

            (c) Meetings. Each Operating Team shall meet as agreed by its

members or as directed by the JSC. Each Party shall bear its own costs

associated with holding and attending such meetings.

 

             (d) Initial Operating Teams. The JSC shall establish the following

two (2) Operating Teams, with such number of representatives of each Party and

such decision-making authority as the JSC shall determine:

 

                  (i) the Research Operations Team, which shall be responsible

for matters relating to the tactical aspects of the Research Plan, including:

 

                        (x) coordinating, monitoring and reporting research

                        progress, resource allocation and ensuring open exchange

                        between the Parties with respect to Research

                        Collaboration activities; and (y) determining which

                        Reference Compounds or Lilly Compounds to include in the

                         Research Collaboration to aid in crystallization;

 

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                  (ii) the Technology Operations Team, which shall be

responsible for matters relating to the successful installation of the SGX

Process Technology and the Platform at the Lilly San Diego Facility and the

Lilly Indianapolis Facility, including:

 

                        (x) reviewing, directing and supervising the performance

                        of the Technology Installation Plan and revising the

                        Technology Installation Plan from time to time as

                        necessary; and (y) coordinating, monitoring and

                        reporting installation progress and ensuring open

                         exchange between the Parties with respect to Technology

                        Installation Plan activities;;

 

                  (iii) For avoidance of doubt, it is intended that the JSC will

delegate decision-making authority for day-to-day management of the

Collaboration to the Operating Teams described in this Section 2.8. While the

JSC retains the ability to review the decisions of the Operating Teams, it is

intended that the Operating Teams shall be given latitude to make decisions

without the need to first consult the JSC.

 

      2.9 Eliminated Targets. The JSC will remove a Collaboration Target from

the Research Collaboration and deem such Collaboration Target to be an

"Eliminated Target" for the purposes of Section 5.5(a), upon the occurrence of

any of the following:

 

            (a) either Party requests that the JSC agree to remove a

Collaboration Target from the Research Collaboration and the JSC so agrees;

 

            (b) Lilly determines not to pursue a Collaboration Target as a

[...***...]; notifies the JSC of such decision (which notification Lilly is

obligated to provide the JSC within thirty (30) days of such decision at Lilly)

and the JSC agrees to the removal of such Collaboration Target;

 

            (c) as determined by the JSC, (i) a Target Structure has not been

obtained for the Collaboration Target after reasonable effort, and (ii) it is

reasonable to conclude based on an assessment of technical feasibility, that a

Target Structure will not be obtained by SGX for such Collaboration Target

before the second anniversary of the Effective Date; or

 

            (d) at any time the total number of Collaboration Targets included

in the Research Collaboration for which Target Structure has not yet been

obtained exceeds [...***...] ([...***...]); in such event, the JSC will, within

thirty (30) days of a request by either Party, deem such number of Collaboration

Targets exceeding [...***...] ([...***...]) as Eliminated Targets in accordance

with this Section 2.9, as results in there being no more than [...***...]

([...***...]) Collaboration Targets included in the Research Collaboration for

which Target Structure has not been obtained. The JSC shall be responsible for

deciding which targets shall be excluded from Collaboration Targets under this

Section 2.9 (d).

 

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            2.10 Option to Extend Term of the Research Collaboration. On or

before the second anniversary of the Effective Date, Lilly will have the right

to extend the Term of the Research Collaboration for an additional [...***...]

period. In such event the Parties will negotiate in good faith the terms of such

extension, provided however, nothing in this Section 2.10 shall obligate the

Parties to enter into such extension.

 

3.     TECHNOLOGY TRANSFER

 

      3.1 Technology Installation Plan. Within three (3) months following the

Effective Date, SGX will prepare and the JSC will review and approve, a

Technology Installation Plan, based on the outline plan attached as Exhibit C.

The Technology Installation Plan may be updated or otherwise amended (in

accordance with Section 2.7(d)) as necessary from time to time by the JSC. Prior

to the approval by the JSC of the Technology Installation Plan, SGX may begin

ordering the equipment as described in Appendix D2. SGX shall supply any

existing validation documentation on SGX Process Technology, and will discuss

with Lilly the results of Lilly's gap analysis to be performed during the

Technology Installation Period. At Lilly's request, SGX will install the

components of the SGX Bioinformatics Technology listed in Appendix F at Lilly in

Indianapolis in advance of the installation of the SGX Process Technology at the

Lilly San Diego Facility. Upon installation, SGX will provide Lilly with a

reasonable amount of training on the use of this technology, provided however,

that any such training shall be included in the number of days allocated to

Initial Training under Section 3.4(a) below.

 

      3.2 Installation.

 

             (a) Installation at Lilly San Diego Facility. SGX will, at Lilly's

expense in accordance with Section 4.3, procure and install the Platform (other

than the IT Infrastructure) and install the SGX Process Technology on the

Platform at the Lilly San Diego Facility in accordance with the Technology

Installation Plan, provided that Lilly has purchased and installed, at its

expense, the IT Infrastructure at the Lilly San Diego Facility or at Lilly, as

agreed in the Technology Installation Plan (including in each case obtaining

from Third Parties the necessary licenses to Third Party Technology detailed in

Exhibit E). SGX will have no obligation to acquire or pay for any Third Party

Technology or any other part of the IT Infrastructure. SGX will provide the

Lilly San Diego Facility with access to certain components of SGX's IT

Infrastructure as described in the Technology Installation Plan. In the event of

any delay by Lilly in (i) approving the Technology Installation Plan, (ii)

obtaining a lease to the Lilly San Diego Facility and entering into a sublease

with SGX beyond one month after the Effective Date; (iii) approving the plans

and budget for the tenant improvements to the Lilly San Diego Facility,

including any revisions thereto, beyond one week after submission of such plans,

budgets or revisions thereto to Lilly by SGX, (iv) procuring and installing the

IT Infrastructure, or any other Platform components which the Parties agree

Lilly will procure, beyond the applicable timeline in the Technology

Installation Plan; or (v) procuring licenses to Third Party Technology required

for the Phase IA and Phase IB validation experiments as detailed in the

Technology Installation Plan, beyond the

 

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applicable timeline in the Technology Installation Plan, then upon request by

either Party, the timelines for installation in the Technology Installation

Plan, will be adjusted correspondingly; provided however: (i) in the event such

delay results in the Phase IA validation experiments described in Exhibit G not

commencing before the start of the [...***...] ([...***...]) month following the

Effective Date, then (A) Lilly shall immediately pay SGX [...***...]

([...***...]%) of the payment under Section 4.2(b), notwithstanding that the

Phase IA Acceptance Criteria may not yet have been achieved, and (B) commencing

at the beginning of the [...***...] ([...***...]) month following the Effective

Date and continuing through the [...***...] ([...***...]) month after the

Effective Date, one Collaboration Target will be removed from the Phase IB(ii)

validation experiment each month with the order of removal of such Collaboration

Targets being from the most difficult (within Level 2+) to the least difficult

(within Level 1); and (ii) in the event such delay results in the Phase IA and

Phase IB validation experiments not commencing before the start of the

[...***...] ([...***...]) month following the Effective Date, Lilly shall

immediately pay SGX the remaining payments due under Section 4.2(b) and 4.2(c),

notwithstanding that the Phase IA Acceptance Criteria and Phase IB Acceptance

Criteria may not yet have been achieved, and notwithstanding that such payments

are made, SGX will conduct the Phase IA and Phase IB validation experiments at

the Lilly San Diego Facility using reasonable diligence, as soon as the Lilly

San Diego Facility becomes available for such activities, provided however, in

the case of the Phase IB(ii) experiments, that the Term of the Research

Collaboration has been extended to allow such activities, in accordance with

Section 2.10. SGX will assist Lilly in the procurement of the IT Infrastructure,

including without limitation, liaising with Third Party providers of hardware

and Third Party Technology, as agreed by the JSC.

 

            (b) Installation at the Lilly Indianapolis Facility. At a time

determined by Lilly, but in no event later than the earlier of (i) the

expiration of Lilly's lease to the Lilly San Diego Facility and (ii) [...***...]

([...***...]) years after the commencement of Lilly's lease to the Lilly San

Diego Facility (the "Cut-Off Date"), SGX will disassemble the Platform and

uninstall the Licensed Technology, at the Lilly San Diego Facility, and

reassemble and reinstall the Platform and Licensed Technology at a facility of

Lilly in Indianapolis designated by Lilly (the "Lilly Indianapolis Facility") in

accordance with the Technology Installation Plan. Notwithstanding anything to

the contrary in this Agreement, if Lilly relocates the Platform and/or the

Licensed Technology after the Cut-Off Date, SGX will have no further obligations

under Article 3 with respect to the Platform or the Licensed Technology. Lilly

will be responsible for: (i) the costs of Third Party vendors of Platform

components for repackaging, transportation and reinstallation of the Platform,

and all other reasonable costs associated with the transportation (collectively

the "Relocation") of the Licensed Technology and the Platform under this Section

3.2(b), in accordance with Section 4.3(c); (ii) Relocation of the IT

Infrastructure to the Lilly Indianapolis Facility prior to commencement of the

reinstallation of the Licensed Technology at the Lilly Indianapolis Facility and

(iii) making fully available the Lilly Indianapolis Facility, services and Lilly

personnel necessary for installation in accordance with the Technology

Installation Plan. SGX will use reasonable diligence in performing its

obligations under this Section 3.2(b).

 

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      3.3 Acceptance.

 

            (a) Phase IA. Promptly upon notification by SGX to Lilly that it has

installed the SGX Process Technology and Platform at the Lilly San Diego

Facility, Lilly, in consultation with the JSC, shall determine in good faith

whether such installation satisfies the Phase IA Acceptance Criteria.

 

            (b) Phase IB. Promptly upon notification by SGX to the JSC that it

has completed the Phase IB validation, Lilly, in consultation with the JSC,

shall determine in good faith whether such validation satisfies the Phase IB

Acceptance Criteria. Upon the determination by Lilly of achievement of the Phase

1B Acceptance Criteria but in no event later than the end of the Term of the

Research Collaboration, SGX will assign to Lilly its entire right, title and

interest in and to the Platform components procured by SGX on behalf of Lilly

under Section 3.2(a), installed at the Lilly San Diego Facility, including

without limitation, assignment of Third Party warranties and service contracts

where permitted.

 

            (c) Phase II. Promptly upon notification by SGX to Lilly that it has

installed the SGX Process Technology and Platform at the Lilly Indianapolis

Facility, Lilly, in consultation with the JSC, shall determine in good faith

whether such installation satisfies the Phase II Acceptance Criteria.

 

      3.4 Maintenance, Training and Technical Support. Once Lilly has determined

that the Phase IA Acceptance Criteria have been met, and payment has been made

by Lilly pursuant to Section 4.2(b), SGX will provide the following maintenance,

training and technical support services to Lilly:

 

            (a) Initial Training. SGX will provide, a training course at the

Lilly San Diego Facility (or at some other location as may be agreed by the JSC)

for Lilly personnel to receive detailed training on the operation of the

Licensed Technology (other than SGX Research Stage Technology) on the Platform

("Initial Training"). Such Initial Training will be conducted over a period of

no more than [...***...] ([...***...]) months and will comprise a total of at

least [...***...] ([...***...]) person months. Lilly will ensure that Lilly

personnel with appropriate technical skill are available at the Lilly San Diego

Facility to receive such training.

 

            (b) On-Site Training, Maintenance and Technical Support. During the

[...***...] ([...***...]) month period following completion of the Initial

Training, SGX will provide at least [...***...] ([...***...]) person days of

support for the Licensed Technology (other than SGX Research Stage Technology)

on the Platform at the Lilly San Diego Facility. If the required support results

from inherent problems with the Licensed Technology and is not due to Lilly's

action or inactions related thereto, then such support shall not count against

such [...***...] ([...***...]) person days. During the [...***...] ([...***...])

month period following payment by Lilly pursuant to Section 4.2(d), SGX will

provide at least [...***...] ([...***...]) person days of support for the

Licensed Technology (other than Research Stage Technology) on the Platform, at

the Lilly Indianapolis Facility. At Lilly's option, such support at the Lilly

Facilities may comprise: training, routine maintenance, and/or resolution of

defects or errors. Should

 

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additional assistance be required by Lilly beyond the [...***...] ([...***...])

days at the Lilly San Diego Facility or the [...***...] ([...***...]) days at

the Lilly Indianapolis Facility, SGX will provide such assistance as is agreed

by the JSC at a consulting rate comparable to reasonable commercial software

support service rates. Contact person(s) designated by each of the Parties shall

be the sole contacts for the coordination, delivery and receipt of the support

services under Sections 3.4(b) and (c) and shall be knowledgeable and trained in

the use of the applicable SGX Process Technology.

 

            (c) Support. For the [...***...] ([...***...]) month period

following the achievement of the Phase II Acceptance Criteria, SGX will provide

Lilly with a reasonable amount of electronic mail and telephone support for the

Licensed Technology (other than SGX Research Stage Technology), with email being

the primary means of support, for, among other things, problem determination,

verification and resolution, on a email-back basis, during SGX's normal business

hours of 8 am to 5 pm Pacific Standard Time, in accordance with the schedule

described in Exhibit H.

 

            (d) Limitations. The maintenance and technical support described

above shall be provided by SGX only for the Licensed Technology (other than SGX

Research Stage Technology) used in conjunction with the Platform. In the event

that Lilly (i) makes Platform Changes that are not agreed by the JSC, (ii) does

not accept a SGX Improvement, or Other Invention recommended by SGX, or (iii)

does not acquire additional Third Party Technology or implement other Platform

Changes recommended by SGX as necessary for the operation of the Licensed

Technology, or (iv) makes modifications to the Licensed Technology other than

those agreed by the JSC, SGX will have no obligation to provide maintenance or

technical support for the Licensed Technology modified or not modified by such

actions or inactions, respectively, of Lilly. Notwithstanding the previous

sentence, while a SGX Improvement or Other Invention is being installed at

Lilly, SGX shall continue to support the earlier release of the applicable

Licensed Technology only until the JSC determines that the SGX Improvement or

Other Invention has been successfully installed at Lilly. In addition, in the

event that any problem is the result of an action or inaction of Lilly as

described in (i) through (iv) above, SGX shall have the right to charge Lilly at

SGX's standard rates (comparable to reasonable commercial software support

rates), for the time spent resolving such problem. SGX will have no obligations

under this Section 3.4 with respect to SGX Research Stage Technology.

 

      3.5 Obligations. The Parties will:

 

            (i) ensure that the contact persons designated by each Party shall

be the sole contact for the coordination and receipt of the services provided

under Section 3.4; such person may be changed upon notice to the other Party;

 

            (ii) maintain during the Term of the Technology Collaboration,

adequate network connectivity as necessary to the systems of Lilly running the

SGX Process Technology, in a manner consistent with each Party's confidentiality

obligations to Third Parties, including to enable SGX to test and verify

reported problems; and

 

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            (iii) provide reasonable supporting data to and aid each other in

the identification and correction of reported problems.

 

      3.6 SGX Additional Technology.

 

            (a) Notification and Acceptance. During the Technology Awareness

Period, SGX will provide the JSC with regular confidential updates (at least

quarterly) on the progress of development of SGX Improvements, Other Inventions

and SGX Research Stage Technology ("SGX Additional Technology") and SGX New

Developments, including without limitation, identification of (i) technology

which at the time of such update, SGX reasonably believes it could successfully

transfer to Lilly and (ii) technology which SGX recommends that Lilly have

installed at the Lilly Facilities. Lilly will have the right but not the

obligation to have any such SGX Additional Technology installed at the Lilly San

Diego Facility and/or the Lilly Indianapolis Facility, and if Lilly elects to

have such technology installed: Lilly will pay SGX for the reasonable costs of

such installation; such SGX Additional Technology will be deemed Licensed

Technology; and SGX will have the obligation to provide Lilly with support under

the terms of Sections 3.4(b) and (c) for such SGX Additional Technology (other

than SGX Research Stage Technology).

 

            (b) SGX New Developments. In the event that Lilly desires to obtain

a license to any SGX New Developments identified by SGX to the JSC in accordance

with Section 3.6(a), Lilly will provide written notice of such desire to SGX

within thirty (30) days of such identification by SGX and upon receipt of notice

by SGX, the Parties will negotiate in good faith the terms of a such license for

a period of up to ninety (90) days. Nothing in this Agreement will obligate SGX

to develop any SGX Additional Technology or SGX New Developments or will

obligate the Parties to enter into any license agreement under this Section

3.6(b).

 

            (c) Lilly Request for New Technology. In the event that Lilly

desires SGX to undertake any new development relating to the SGX Process

Technology, it shall present such request to the JSC which shall decide whether

SGX shall undertake such development. In the event that it is decided that SGX

shall undertake such developments, SGX and Lilly shall agree on the

specifications, development schedule and payments for such developments which

shall then be described in detail in the Technology Installation Plan. Any

technology developed by SGX, or jointly by SGX and Lilly under this Section

3.6(c) will be deemed SGX Improvements.

 

      3.7 Lilly New Developments and Improvements.

 

            (a) During the Technology Awareness Period, Lilly will provide the

JSC with regular confidential updates (at least quarterly) on the progress of

development of Lilly Improvements, Lilly New Developments and Other Inventions,

including without limitation, identification of technology, which at the time of

such update, Lilly reasonably believes it could successfully transfer to SGX.

SGX will have the right but not the obligation to have any such Lilly

Improvements licensed to SGX and if SGX

 

                            Page 15 of 68

<PAGE>

 

elects to license such Lilly Improvements, Lilly will provide SGX with all

necessary documentation and materials to enable SGX to exercise such rights.

 

            (b) In the event that SGX desires to obtain a license to any Lilly

New Developments identified by Lilly to the JSC in accordance with Section

3.7(a), SGX will provide written notice of such desire to Lilly within thirty

(30) days of such identification by Lilly and upon receipt of notice by Lilly,

the Parties will negotiate in good faith the terms of a such license for a

period of up to ninety (90) days. Nothing in this Agreement will obligate Lilly

to develop any Lilly New Developments or will obligate the Parties to enter into

any license agreement under this Section 3.7(b).

 

      3.8 Platform Changes. During the Term of the Technology Collaboration, (i)

Lilly will inform the JSC in advance of any upgrades, modifications,

enhancements or changes it proposes making to the Platform during the Term of

the Technology Collaboration ("Platform Changes"); and (ii) SGX will inform the

JSC of any Platform Changes it has implemented at SGX or recommends Lilly

implement at the Lilly Facility.

 

      3.9 Use of the Lilly San Diego Facility.

 

            (a) By SGX Employees. During the Term of the Technology

Collaboration, SGX employees, consultants and agents involved in the

Collaboration, may use the Lilly San Diego Facility, and the Platform and

Licensed Technology installed at the Lilly San Diego Facility: (i) for any

purpose in connection with the Technology Installation Plan; (ii) for the

conduct of Research Plan activities as agreed by the JSC; and (iii) to fulfill

its support obligations under Section 3.4.

 

            (b) By Lilly Employees. During the Term of the Technology

Collaboration, Lilly employees and consultants may use the Lilly San Diego

Facility, and the Platform and Licensed Technology installed at the Lilly San

Diego Facility: (i) for the conduct of Technology Installation Plan activities

as agreed by the JSC; (ii) for the conduct of Research Plan activities as agreed

by the JSC; (iii) for any purpose permitted under Lilly's licenses in Section

5.1, provided, however that Lilly activities do not interfere with SGX's ability

to fulfill the Phase IB Acceptance Criteria; and (iv) upon the end of the Term

of the Research Collaboration and prior to transfer of the Platform and Licensed

Technology to the Lilly Indianapolis Facility, for any purpose permitted under

Lilly's licenses in Section 5.1, provided in each case that Lilly has first

obtained all necessary licenses, permits and permissions to use the Lilly San

Diego Facility, reasonably acceptable to SGX.

 

4.      CONSIDERATION

 

      4.1 Research Fee.

 

            (a) Within thirty (30) days after the Effective Date, Lilly will pay

to SGX a non-refundable research fee of two million US dollars ($2,000,000).

 

                            Page 16 of 68

<PAGE>

 

             (b) Within forty five (45) days after the first anniversary of the

Effective Date, Lilly will pay to SGX a non-refundable research fee of

$[...***...], provided that SGX has met the FTE commitment set forth in Section

2.1 for the first year of the Research Collaboration.

 

            (c) Within forty five (45) days after the second anniversary of the

Effective Date, Lilly will pay to SGX a non-refundable research fee of

[...***...] US dollars ($[...***...]), provided however, that SGX has committed

a [...***...] ([...***...]) [...***...] to the Research Collaboration during the

period between March 26, 2003 and the [...***...] of the Effective Date. If SGX

has not honored such commitment, then Lilly will pay SGX a pro-rated amount

proportionate with the amount of FTEs that have actually been used as long as

the total number of FTEs committed by SGX during the period between March 26,

2003 and the [...***...] of the Effective Date exceeds [...***...]. In the event

that SGX did not receive payment under Section 4.1(b) but has committed a total

of [...***...] ([...***...])[...***...] to the Research Collaboration during the

period between March 26, 2003 and the second anniversary of the Effective Date,

Lilly will pay a further non-refundable research fee to SGX of [...***...]

dollars ($[...***...]) within forty-five (45) days after the second anniversary

of the Effective Date.

 

      4.2 Technology Access Fee.

 

            (a) Within thirty (30) days after the Effective Date, Lilly will pay

to SGX a technology access fee of four million US dollars ($4,000,000). If SGX

fails to substantially deliver and install the SGX Process Technology at the

Lilly San Diego Facility by December 31, 2006, then SGX agrees to refund

[...***...] percent ([...***...]%) of such fee.

 

            (b) Within forty five (45) days after determination by Lilly that

the Phase IA Acceptance Criteria have been met, Lilly will pay to SGX a

non-refundable technology access fee of [...***...] US dollars ($[...***...]),.

 

            (c) Within forty five (45) days after determination by Lilly of

achievement by SGX of the Phase IB(i) Acceptance Criteria, Lilly will pay to SGX

a non-refundable technology access fee of [...***...] US dollars ($[...***...]).

Within forty five (45) days after determination by Lilly of achievement by SGX

of the Phase IB(ii) Acceptance Criteria, Lilly will pay to SGX a further

non-refundable technology access fee of [...***...] US dollars ($[...***...]).

 

            (d) Within forty five (45) days after determination by Lilly that

the Phase II Acceptance Criteria have been met, Lilly will pay to SGX a

non-refundable technology access fee of [...***...] US dollars ($[...***...]);

provided however, if Lilly has not instructed SGX to commence [...***...] the

Platform and [...***...] the SGX Process Technology at the Lilly San Diego

Facility within [...***...] ([...***...]) months after Phase IA Acceptance

Criteria are achieved or by [...***...], whichever is later, and

SGX has achieved the Phase IB(i) Acceptance Criteria, Lilly will pay to SGX such

non-refundable technology access fee of [...***...] US dollars ($[...***...])

within four (4)

 

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months thereafter, notwithstanding that the Phase II Acceptance Criteria has not

been met.

 

      4.3 Procurement and Installation Costs.

 

            (a) Procurement of the Platform. SGX will be responsible, at Lilly's

expense, for the procurement of the Platform (other than the IT Infrastructure)

in accordance with the Technology Installation Plan. An estimate of the costs

for the Platform, together with the expected delivery and payment dates, is

attached as Appendix D(1). A budget for such expense shall be proposed by SGX

and approved by the JSC as part of the Technology Installation Plan, based on

the estimate in Exhibit D(1), provided however, during the three (3) months

following the Effective Date, SGX will make reasonable efforts to obtain

detailed quotations from Third Party vendors of Platform components and will

update the estimate accordingly. SGX shall not exceed the agreed upon budget

without the further approval of the JSC. SGX will update the estimate on at

least a quarterly basis during the period during which the Platform is being

procured. Within thirty (30) days after the Effective Date and on a quarterly

basis thereafter, Lilly will pay SGX the amount estimated to be due Third

Parties during the following quarter. In the event of any overpayment in any

quarter, SGX will credit such overpayment towards the next quarterly payment due

from Lilly under this Section 4.3(a). In the event that Lilly has paid more than

SGX has spent after the final quarter of payments, SGX agrees to refund such

overpayment within forty-five (45) days of the end of the quarter.

 

            (b) Lilly San Diego Facility. Lilly will be responsible, at Lilly's

expense for (i) obtaining the necessary lease to the Lilly San Diego Facility

and making payments thereunder and (ii) obtaining and installing the IT

Infrastructure. SGX will be responsible for supervising the tenant improvements

to the Lilly San Diego Facility and Lilly will be responsible for the costs of

such tenant improvements; which shall be paid directly by Lilly to the appointed

architect and general contractor.

 

            (c) Installation. Lilly will pay SGX [...***...] US dollars

($[...***...]) within thirty (30) DayS of receipt of written notification that

the Technology Installation Plan has been approved. Such payment will cover (i)

installing the Platform and Licensed Technology at the Lilly San Diego Facility,

(ii) uninstallation of the Platform and Licensed Technology at the Lilly San

Diego Facility and reinstallation of the Platform and the Licensed Technology at

the Lilly Indianapolis Facility if completed prior to the third anniversary of

the Effective Date, and (iii) project management of the procurement of the Lilly

San Diego Facility (including without limitation, designing and supervising

tenant improvements). Lilly shall pay separately the reasonable costs of

Relocation of the Platform and Licensed Technology from San Diego to

Indianapolis as further described in Section 3.2(b). In the event that Lilly

decides to install the Licensed Technology and Platform at the Lilly

Indianapolis Facility under Section 3.2(b) and such installation is completed

after the third anniversary of the Effective Date, Lilly will pay SGX

[...***...] US dollars ($[...***...]) within thirty (30) days of completion of

such installation. Such payment will cover uninstallation of the Licensed

Technology at the Lilly San Diego Facility and reinstallation of the Licensed

Technology at the Lilly

 

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Indianapolis Facility and support for such Licensed Technology in accordance

with Section 3.4(b).

 

5.     LICENSES

 

      5.1 Licenses to Lilly. Subject to the terms and conditions of this

Agreement, SGX hereby grants to Lilly, the following licenses:

 

           


 
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