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Affymetrix Inc

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1) CHANGE OF CONTROL PLAN

2) LEASE

3) LEASE

4) SIXTH AMENDMENT TO LEASE

5) SECOND AMENDMENT TO LEASE

6) SECOND AMENDMENT TO LEASE

7) Investor Contact

8) Change of Control Plan

9) 2000 Equity Incentive Plan

10) AFFYMETRIX, INC. NON-QUALIFIED STOCK OPTION GRANT NOTICE AND AGREEMENT

11) AFFYMETRIX, INC. RESTRICTED STOCK GRANT NOTICE AND AGREEMENT

12) Dear Rick,

13) AFFYMETRIX, INC. Change of Control Plan

14) NONQUALIFIED SUPPLEMENTAL DEFERRED COMPENSATION PLAN ADOPTION AGREEMENT

15) NONQUALIFIED SUPPLEMENTAL DEFERRED COMPENSATION PLAN

16) AFFYMETRIX, INC. AMENDED AND RESTATED 2000 EQUITY INCENTIVE PLAN

17) Change of Control Plan

18) AFFYMETRIX CLOSES $ 275 MILLION SENIOR CONVERTIBLE NOTES OFFERING

19) AFFYMETRIX ANNOUNCES PRICING OF OFFERING OF SENIOR CONVERTIBLE NOTES DUE 2038

20) AFFYMETRIX ANNOUNCES PROPOSED $250 MILLION OFFERING OF SENIOR CONVERTIBLE NOTES DUE 2038

21) PRESS RELEASE

22) LEASE

23) AFFYMETRIX, INC. RESTRICTED STOCK AGREEMENT

24) 2001 STOCK OPTION PLAN

25) AGREEMENT AND PLAN OF MERGER AND REORGANIZATION PARALLELE BIOSCIENCE, INC., AFFYMETRIX, INC.

26) Lease

27) Loan Agreement

28) COLLABORATION SUPPLY AGREEMENT

29) Indenture